17 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "type": "rnaseq", "matrix": {"group_order": "1", "column": "BAM files", "menu": "rnaseq", "group": "ENA", "row": "brain"}} 18 Spliced-read support for brain brain intron-spanning reads 1 {"zmenu": "Supporting_alignment", "label_key": "", "colour_key": "intron_support", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "group": "ENA", "row": "brain"}} 21 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"zmenu": "RNASeq", "label_key": "RNASeq [biotype]", "colour_key": "human_rnaseq", "type": "rnaseq", "matrix": {"column": "Gene models", "menu": "rnaseq", "group": "ENA", "row": "brain"}} 9 Alignments of heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Heart RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Heart", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 11 Spliced-read support for heart Heart intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Heart", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 22 Annotation generated from heart RNA-seq data Heart RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Heart", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 10 Alignments of muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Muscle RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Muscle", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 13 Spliced-read support for muscle Muscle intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Muscle", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 23 Annotation generated from muscle RNA-seq data Muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Muscle", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 15 Alignments of olfactory RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Olfactory RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Olfactory", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 16 Spliced-read support for olfactory Olfactory intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Olfactory", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 24 Annotation generated from olfactory RNA-seq data Olfactory RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Olfactory", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 12 Alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Ovary RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Ovary", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 14 Spliced-read support for ovary Ovary intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Ovary", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 25 Annotation generated from ovary RNA-seq data Ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Ovary", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 19 Alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Testis RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Testis", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 20 Spliced-read support for testis Testis intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "ENA", "row": "Testis", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 26 Annotation generated from testis RNA-seq data Testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "ENA", "row": "Testis", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 27 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}